|| '''Deliverables''' || '''Status''' || '''Published as''' || '''notes''' ||
|| D.6.1[[BR]][[BR]]R-analysis tools for QTL mapping || Done || xQTL workbench ||   ||
|| D.6.2[[BR]][[BR]]R-analysis tools for eQTL and pQTL mapping || Done || xQTL workbench ||   ||
|| D.6.3[[BR]][[BR]]R-analysis tools for integration of eQTL, pQTL and QTL networks || Done || wormQTL ||   ||
|| D.6.4[[BR]][[BR]] Analysis tools for finding   regulator of (e/p)QTLs mapping to same locus || Done || wormQTL ||   ||
|| D.6.5[[BR]][[BR]]Cytoscape network visualisation tools || To be done before June   1, 2012 || wormQTL || Joeri/Danny[[BR]][[BR]]provide gif files and property files so that users can use Cytoscape   to visualize network and annotation ||
|| D6.6[[BR]][[BR]]Results from analysis run on QTL data || Month45 ||   ||   ||
|| D6.7[[BR]][[BR]]Results from analysis run on eQTL and pQTL data || Month45 ||   ||   ||
|| D6.8[[BR]][[BR]]Results from integrative analysis || Month51 ||   ||   ||
|| D6.9[[BR]][[BR]]Results from extended regulatory analysis || Month51 ||   ||   ||
|| D.6.10[[BR]][[BR]]Requirements analysis || Done || xQTL workbench ||   ||
|| D6.11[[BR]][[BR]]DSL genetical genomics experiments in C. elegans || Done || wormQTL ||   ||
|| D.6.12[[BR]][[BR]]Code generator || Done || xQTL workbench ||   ||
|| D.6.13[[BR]][[BR]]Reusable components || Done || xQTL workbench ||   ||
|| D.6.14[[BR]][[BR]]Pilot data base || Done || wormQTL ||   ||
|| D.6.15[[BR]][[BR]]Data loaded into database || May 11, 2012 || wormQTL || Yang/Basten/Joeri will provide a detailed list ||
|| D.6.16[[BR]][[BR]]Pilot information infrastructure: R-analysis tools connected to   database || Done || wormQTL ||   ||
|| D.6.17[[BR]][[BR]]Pilot information infrastructure: external tools connected to system || ongoing || wormQTL || Done: Rqtl, !GenomeBrowser,  R,   Excel, etc[[BR]][[BR]]TODO: We are thinking to include vulva model as tool as well. Input from CAM is seriously needed*. ||
|| D.6.18[[BR]][[BR]]Pilot analysis workflows: biologists able to run useful workflows || May 16, 2012 ||   || Yang is going to  generate 2~3   example workflows. Figures and text will be provided. ||
|| D19-25: [CAM] ||   ||   ||   ||
|| D.6.26[[BR]][[BR]]Cross-link with results from genome-wide association studies on human   cancer || Month 51 ||   ||   ||
|| D.6.27 [CAM] ||   ||   ||   ||