Monitoring Tomcat

• ​http://tomcat.apache.org/tomcat-5.5-doc/monitoring.html
• ​http://appfuse.org/display/APF/Home

DONE: Conflict in "FreeMarker IDE" : (FreeMarker IDE 1.1.0.v201006011046R-H111-GA Software currently installed: FreeMarker IDE SDK 1.1.0.v201003050540R-H56-GA) Only one of the following can be installed at once: FreeMarker IDE 1.1.0.v201006011046R-H111-GA - FreeMarker IDE 1.1.0.v201003050540R-H56-GA) : removed one . ok

DONE : Remove freemarker/reinstall. Also added jar file in eclipse 's plugin dir. Problem with specific tags in .ftl.

• ​http://www.opensymphony.com/webwork/wikidocs/FreeMarker.html
• ​http://www.opensymphony.com/webwork/wikidocs/Dependencies.html .

DONE : Bug fixed in results returned from db (indexing) .

TODO : Another formatting in table (document per row NOT field per row)

DONE : @ startup mysql is not loading, so molgenis cannot connect to mysql(?) : probably because command is mysqd_safe5 --> alias in profile . 

TODO :  test in next restart .