Changes between Initial Version and Version 1 of GccStart


Ignore:
Timestamp:
2010-10-01T23:26:13+02:00 (8 years ago)
Author:
mswertz
Comment:

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  • GccStart

    v1 v1  
     1[[BlogList(recent=5, max_size=250, format=float, heading=News)]]
     2
     3= Welcome to the Genomics Coordination Centre =
     4The center for genomics databases and analysis tools, courses and workshops. See AboutGcc
     5
     6{{{#!td
     7
     8= Databases =
     9* [http://www.molgenis.org MOLGENIS] - biosoftware toolkit
     10* [http://www.xgap.org XGAP] - GWAS and GWL
     11* [http://www.animaldb.org AnimalDB] - animal observation
     12* [http://gbic.target.rug.nl/trac/lsdb MutationDB] - mutations and patients
     13* [http://www.phenoflow.org Pheno] - phenotype observations
     14* [http://gbic.target.rug.nl/trac/mage MAGE] - microarray database
     15
     16}}}
     17{{{#!td
     18
     19= Analysis =
     20 * [RqtlPackage R/QTL] - R package QTL analysis
     21 * [http://www.ontocat.org OntoCAT] - ontology toolkit
     22 * [DesignGg Design GG] - experimental design of QTL experiments
     23 * [GenomicIslandsAnalysis Genomic Islands] - genomic islands
     24 * [wiki:PeakML] format - file format for mass spectrometry data
     25 * MzMatch - pipeline for mass spectrometry experiments in the area of metabolomics
     26}}}
     27|-------------------
     28{{{#!td
     29
     30= Intranet =
     31 * GccPlugins - overview of GCC plugins
     32 * GccMeetings - Notes on our weekly work meetings
     33 * GccProjects - Matrix of ongoing projects and their relationships
     34 * GccManuals - How to use the software and servers that we have
     35 * GccLinks - Hyperlinks to papers and websites of interest
     36 * GccTeam - Members of the group
     37 * GccCalendar - Meetings etc
     38 * GccGroup - Our mailing list and group discussion site
     39 * GccServers - How to connect to our servers
     40 * GccIfolder - How to connect to our iFolder
     41 * GccLogs - Logbooks of GCC people
     42
     43}}}
     44{{{#!td valign="top"
     45
     46= Collaborations =
     47* [http://gbic.biol.rug.nl GBIC] - Groningen Bioinformatics Center
     48* [http://www.geneticsgroningen.nl Genetics] - UMCG genetics department
     49* [http://www.rug.nl/cit/index] - Groningen Center for Information Technology
     50* [http://www.bbmriwiki.org BBMRI.NL] - Bioinformatics for Biobanking project
     51* [http://wiki.nbic.nl NBIC] - Netherlands BioInformatics Center
     52* [http://www.lifelines.nl LifeLines] - 30yr/165.000 people cohort study
     53* [http://www.ebi.ac.uk EBI] - European Bioinformatics Institute
     54* [http://www.gen2phen.org EU-GEN2PHEN] - Genotype to Phenotype project
     55* [http://www.casimir.ac.uk CASIMIR] - Coordination and Sustainability of International Mouse Informatics Resources
     56* [http://www.helmholtz-hzi.de/en/research/host_resistance_and_susceptibility/infection_genetics/externally_funded_projects/sysgenet/ SYSGENET] -  European systems genetics network
     57
     58}}}