= Enhancements for MOLGENIS on various levels =
This is the index for future enhancements of MOLGENIS. Current list of ideas:

== Core ==
 * MultiColXrefs -- Enable xrefs to be of form xref_label='experiment.name,sample.name'

== Generators ==
 * JpaGenerator -- Add the Java Persistency Api [http://java.sun.com/developer/technicalArticles/J2EE/jpa/ JPA] annotation system as alternative backend to MOLGENIS
 * GwtGenerator -- Add the Google Web Toolkit [http://code.google.com/webtoolkit/ GWT] as generation target for Rich UIs
 * GalaxyGenerator -- Integrate the [http://g2.trac.bx.psu.edu/ Galaxy] XML model into MOLGENIS for processing tools
 * OgsiFramework -- Use the [http://www.eclipse.org/osgi/ OGSi] framework to integrate MOLGENIS plugins at runtime
 * Your idea here...

== Plugins ==
MOLGENIS has a plugin system. See MolgenisPluginFramework; these plugins can be of general use. Current plugin projects:

 * OntologyBrowserPlugin -- Integrate ontology sources like [http://www.ebi.ac.uk/ontology-lookup/ OLS] and [http://bioportal.bioontology.org/ BioPortal]
 * DataMatrixPlugin -- Show matrix type data in rows * columns form
 * AccountManagerPlugin -- Enable users to register and login into a MOLGENIS
 * QueryPlugin -- Enable users to freely query MOLGENIS similar to [http://www.biomart.org/ BioMart] and [http://www.intermine.org/ InterMine]

Ideas:

 * GenomeBrowserPlugin
 * MolgenisProcessing
 * SemanticLayer
 * Your plugin here