== Requirements Molgenis application VM's ==

Software:
- Ant 1.8.2 (http://ant.apache.org/)
- Subversion 1.7.1 (http://subversion.apache.org/)
- Java 6.29 (http://www.java.com/)
- Libcurl 7.23.1 (SUSE @ 7.22.0, http://curl.haxx.se/)
- Tomcat 7.0.22 (http://tomcat.apache.org/)
- HTTP server (http://httpd.apache.org/)
- R 2.14 (http://www.r-project.org/)
- MySQL 5.5.17 (http://www.mysql.com/)
- GNU nano 2.2.6 (http://www.nano-editor.org/)

Hardware:
- 1GB to 10TB disk space depending on demo or heavy production app
- 4GB to 16GB RAM depending on demo or heavy production app
- 4 to N cores depending on demo or heavy production app

Customizations:
- The default /etc/my.cnf MySQL config file is for "small" DB systems (Server with 128 MB Mem total). This is sub-optimal for all but the smallest DBs we use and makes DBs needlessly slow when we have 4+GB Mem. Would be nice if the VMs will include a patched my.cnf that fits the VMs resources better...

Current state of '''molgenisgold''':
- Ant: 1.8.2 on path
- Subversion: 1.5.7 on path, will test if that is good enough
- Java: 1.6.0 IBM J9 VM on path, probably good
- Libcurl: 7.19.0 installed, probably OK
- Tomcat: tomcat6 installed
- HTTP server: apache2 installed
- R: 2.13 on path
- MySQL: 5.0.67 on path, probably OK
- GNU nano: not installed

== How to install RPM ==

* CheatSheet http://en.opensuse.org/images/1/17/Zypper-cheat-sheet-1.pdf
* Find RPM http://rpm.pbone.net/ -> SuSE 11.X

dus:
wget [RPM]
zypper in [RPM]

Install R:
* http://cran.r-project.org/bin/linux/suse/README.html

libcurl install: zypper in libcurl-devel

fortran install (for R/qtl): zipper in gcc*