= MOLGENIS source code =

You can check the latests version (currently 3.3) of the MOLGENIS code via the [http://www.molgenis.org/browser browser] or check it out from our open repository at http://www.molgenis.org/svn.

If you want to keep track of what is happening in the svn, you can connect to the commit channel at http://groups.google.com/group/molgenis-commits/

== What do I need? ==

MOLGENIS consists of two main components. Current version is 3.3:
 1. The software generator 'molgenis'. Check out from http://www.molgenis.org/svn/molgenis/3.3
 1. The application template 'molgenis_distro'. Check out from http://www.molgenis.org/svn/molgenis_distro/3.3

Inside the molgenis_distro you will find in handwritten the '!MolgenisGenerate.java' program.
See MolgenisGuide for usage.

== What is in the other packages? ==

 * [http://www.molgenis.org/browser/archive archive] -- contains older versions
 * [http://www.molgenis.org/browser/molgenis molgenis] -- core project. Inside are Eclipse projects, each folder a version
 * [http://www.molgenis.org/browser/molgenis_distro molgenis_distro] -- the application template. Inside are Eclipse projects, each folder a version
 * [http://www.molgenis.org/browser/molgenis_test molgenis_test] -- series of models and test suites to verify MOLGENIS functionality
 * [http://www.molgenis.org/browser/molgenis_online molgenis_online] -- development of the online version of MOLGENIS generator
 * [http://www.molgenis.org/browser/molgenis_processing molgenis_processing] -- development of processing components as extension to molgenis
 * [http://www.molgenis.org/browser/molgenis_taverna_plugin molgenis_taverna_plugin] -- development of a taverna workbench plugin to access MOLGENIS more easily than just web services

Temporary, need to be cleaned up:
 * molgenis3_4_1
 * molgenis4eb
 * molgenis4xgap_importwizard
 * molgenis_online
 * molgenis_plugin_matrix
 * sequence_lims -- development of a sequence lims
 * tags
 * xmi_to_molgenis -- convertor from xmi (UML) to molgenis.xml