= Participants Laboratories of Interfaculty Mass Spectrometry Centre - Phase 1 (Jan 2011 - Dec. 2012)=

== Analytical Biochemistry ==

'''Head''': Rainer Bischoff[[BR]]
'''Staff''': Peter Horvatovich, Natalia Govorukhina, Jos Herman[[BR]]
'''Location''': Building 3211, Antonius Deusinglaan 1, 9713 AV Groningen

=== Main MS Equipments ===
* Agilent 6510 QTOF equipped with chipcube and Agilent 1200 HPLC system equipped with nano and capillary pumps and thermostated autosampler, acquisition software: MassHunter B02.00[[BR]]
* Agilent 1100 series LC/MSD-SL iontrap with chipcube and Agilent 1100 HPLC system equipped with nano and capillary pumps and thermostated autosampler, acquisition software: Chemstation B01.03 (for LC) and LC/MSD Trap Software and Data Analyst 3.5 (for MS)[[BR]]
* Agilent 1100 series LC/MSD-SL iontrap with Agilent 1100 HPLC system equipped with nano and capillary pumps and thermostated autosampler, acquisition software: Chemstation B01.03 (for LC) and LC/MSD Trap Software and Data Analyst 3.5 (for MS)[[BR]]
* Agilent 6410 Triple quad LC-MS equipped with chipcube, Prospect 2 switching valve system & autosampler, and Agilent 1200 HPLC system equipped with nano and capillary pumps and thermostated autosampler, acquisition software: MassHunter B06.01[[BR]]
Contact person: Jos Hermans[[BR]]
=== Main Bioinformatics tools ===
==== Commercial ====
'''Software''': Phenyx 2.6.2 peptide and protein identification platform running on dual Xeon server (8 cores) with 16 GB RAM[[BR]]
'''Availability''': online[[BR]]
=== In house developed===
'''Software''': COW-COD, PTW-CODA, DTW-CODA LC-MS time alignment algorithms [[BR]]
'''Availability''': [source code][[BR]]
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