| 1 | name = 'FastQC' |
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| 2 | namelower = name.lower() |
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| 3 | version = '0.11.3' |
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| 4 | |
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| 5 | homepage = 'http://www.bioinformatics.babraham.ac.uk/projects/fastqc/' |
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| 6 | description = """FastQC - A Quality Control application for FastQ files.""" |
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| 7 | |
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| 8 | toolchain = {'name': 'dummy', 'version': 'dummy'} |
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| 9 | easyblock = 'PackedBinary' |
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| 10 | |
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| 11 | java = 'Java' |
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| 12 | javaver = '1.7.0_76' |
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| 13 | versionsuffix = '-%s-%s' % (java, javaver) |
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| 14 | |
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| 15 | dependencies = [(java, javaver)] |
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| 16 | |
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| 17 | # |
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| 18 | # Example URL: |
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| 19 | # http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.3.zip |
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| 20 | # |
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| 21 | source_urls = [('http://www.bioinformatics.babraham.ac.uk/projects/%s' % namelower)] |
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| 22 | sources = [('%s_v%s.zip' % (namelower, version))] |
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| 23 | |
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| 24 | sanity_check_paths = { |
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| 25 | 'files': ["fastqc" ], |
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| 26 | 'dirs': [] |
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| 27 | } |
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| 28 | |
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| 29 | # |
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| 30 | # Make FastQC binary (perl start script) executable. |
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| 31 | # (Mode may by masked by umask.) |
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| 32 | # |
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| 33 | postinstallcmds = ['chmod 775 %(installdir)s/%(namelower)s'] |
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| 34 | |
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| 35 | sanity_check_commands = [('%(namelower)s', '--version')] |
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| 36 | |
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| 37 | moduleclass = 'bio' |
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