High Performance Computing (HPC) Clusters

Production clusters

The UMCG HPC Research clusters are

• ​Nibbler
• ​Vaxtron

Only for users of the Solve-RD project there is also

• ​Fender

For Admins

• Deploy Apps & Data - SOP for central deployment of software and reference data sets.

Molgenis and VMs

Cloud VMs / Jenkins / WordPress

• ​http://serverlist.gcc.rug.nl - List of all VMs in our cloud.
• ​Create a new MOLGENIS instance - You can create a new MOLGENIS VM based on CentOS running this Ansible script
• Install SOP / Deploy MOLGENIS via Jenkins - How to deploy MOLGENIS on a VM using Jenkins.
• SOP WordPress - How to manage WordPress websites

Deploy MOLGENIS v2.x server based on PostGreSQL Golden VM

• Deploy a PostGreSQL based MOLGENIS server - How to deploy a MOLGENIS server compatible with MOLGENIS v2.0 and higher

Internal GCC SOPs

• SOP UMCG network - How to connect to UMCG network
• SOP new Employee (employee) - Manual for employee
• SOP New Employee (team) - Manual for team
• GccSopMolgenisRelease - How to create a MOLGENIS release
• GccSopMolgenisBugfixRelease - How to create a MOLGENIS Bugfix-release
• GccSopSystemsGeneticsRelease - How to create a Systems Genetics release
• GccSopMolgenisComputeRelease - How to create a MOLGENIS Compute release