Changes between Version 18 and Version 19 of BBMRI_task2

Timestamp:

2010-11-09T11:48:39+01:00 (14 years ago)

Author:

antonak

Comment:

--

BBMRI_task2

@@ -1 +1 @@
 ''' Primary goal: to have the semantic search available for BBMRI catalog '''
 
- 1. Get access to http://gbic.target.rug.nl:8080/ (DONE)
- 1. Added user at tomcat file , still cannot have access. Maybe should be in another file?
- 1. scheduled meeting with Eric to set it up through his account.
-
+ * Get access to http://gbic.target.rug.nl:8080/ (DONE)
+ * Added user at tomcat file , still cannot have access. Maybe should be in another file?
+ * scheduled meeting with Eric to set it up through his account.
  * '''reintegrate the semantic search plugin and all dependencies - despoina'''
 
-''' 1. Add the semantic plugin as a plugin inside the bbmri @pheno  '''
+== Add the semantic plugin as a plugin inside the bbmri @pheno ==
 
- 1. First locally
-   1. In order to  generate bbmri  we encountered some problem with the Entities  :   name="Contact"   and "Institute" . Conflict with existing entities in pheno model : <entity name="Contact" implements="Identifiable" xref_label="!FirstName,!LastName"> and <entity name="Institute" implements="Identifiable,Nameable" xref_label="name">. (DONE, generate success)
-   1. Install semantic search in bbmri :
-     * Check if plugin file  exists ...ok (DONE)
-     * Check for configuration file if exists (DONE)
-     * Adapt connection variables between code & configuration . Some removed , some added, some more documenattion added. (DONE) .
-     * Check for configuration variables.
-       * Change index location . (DONE)
-       * Change the database field names that are used for the index . (DONE)
-     * (check other dependencies for manual file ) (DONE)
-     * when ready recreate both indexes to see if the are valid created. (DONE)
-     * create ontocat index (by running particular java file) (DONE)
+ * First locally
 
-== '''search examples ''' ==
-     * ''' search and ensure results make sense :Search for each table that have contents that make sense (to search)'''
-       * Biobank :
-         * "Agnes" (a name),
-         * "HIV" (from description),
-         * "musculoskeletal" (word inside description),
-         * "EU-PACT-NL" found only with quotes.
+ * In order to  generate bbmri  we encountered some problem with the Entities  :   name="Contact"   and "Institute" . Conflict with existing entities in pheno model : <entity name="Contact" implements="Identifiable" xref_label="!FirstName,!LastName"> and <entity name="Institute" implements="Identifiable,Nameable" xref_label="name">. (DONE, generate success)
+ * Install semantic search in bbmri :
+   * Check if plugin file  exists ...ok (DONE)
+   * Check for configuration file if exists (DONE)
+   * Adapt connection variables between code & configuration . Some removed , some added, some more documenattion added. (DONE) .
+   * Check for configuration variables.
+     * Change index location . (DONE)
+     * Change the database field names that are used for the index . (DONE)
+   * (check other dependencies for manual file ) (DONE)
+   * when ready recreate both indexes to see if the are valid created. (DONE)
+   * create ontocat index (by running particular java file) (DONE)
+
+== '''search examples ''' ==
+ * ''' search and ensure results make sense :Search for each table that have contents that make sense (to search)'''
+   * Biobank :
+     * "Agnes" (a name),
+     * "HIV" (from description),
+     * "musculoskeletal" (word inside description),
+     * "EU-PACT-NL" found only with quotes.
 
  1. then upload to gbic server .