| 1 | | = 2010-10-19 === Presentation Friday ==* Talk went well* Was expecting more feedback* Kostavas asked on MOLGENIS== Plan BBMRI ==Theme 1: fill the databaseFirst goal: get !LifeLines features included in BBMRI biobank.* get BBMRI catalog running* import the Excel* biobank is a kind of panel* Lifelines is one of the biobanks* Get from Joris is a Excel export Next goal: import more biobank information which we get from our BBMRI-EU colleaguesTheme 2: start with 'semantic molgenis'First goal: link MOLGENIS to external ontology* first enhance N3 file with external mapping* then test if we use that ontology in SPARQL query* if works: then update the MOLGENIS model + generatorNext step: investigate ontologies that should be linked* how about biobankers list of Marco Roos?* disease ontology?* material ontology?Actions* Have Kostavas visit?* Connect to Pedro to investigate his 'semantic molgenis' work?* Connect to BBMRI-EU to request more data? |
| | 1 | = 2010-10-19 = |
| | 2 | |
| | 3 | == Presentation Friday == |
| | 4 | |
| | 5 | * Talk went well |
| | 6 | * Was expecting more feedback |
| | 7 | * Kostavas asked on MOLGENIS |
| | 8 | |
| | 9 | == Plan BBMRI == |
| | 10 | |
| | 11 | Theme 1: fill the database |
| | 12 | |
| | 13 | First goal: get LifeLines features included in BBMRI biobank. |
| | 14 | |
| | 15 | * get BBMRI catalog running |
| | 16 | * import the Excel |
| | 17 | * biobank is a kind of panel |
| | 18 | * Lifelines is one of the biobanks |
| | 19 | * Get from Joris is a Excel export |
| | 20 | |
| | 21 | Next goal: import more biobank information which we get from our BBMRI-EU colleagues |
| | 22 | |
| | 23 | Theme 2: start with 'semantic molgenis' |
| | 24 | |
| | 25 | First goal: link MOLGENIS to external ontology |
| | 26 | |
| | 27 | * first enhance N3 file with external mapping |
| | 28 | * then test if we use that ontology in SPARQL query |
| | 29 | * if works: then update the MOLGENIS model + generator |
| | 30 | |
| | 31 | Next step: investigate ontologies that should be linked |
| | 32 | * how about biobankers list of Marco Roos? |
| | 33 | * disease ontology? |
| | 34 | * material ontology? |
| | 35 | |
| | 36 | Actions |
| | 37 | * Have Kostavas visit? |
| | 38 | * Connect to Pedro to investigate his 'semantic molgenis' work? |
| | 39 | * Connect to BBMRI-EU to request more data? |
