TODO:

• sent email to pheno group about the conflict of the entities : Institute & contact
  • This problem will be solved if the bbmri model is merged in the pheno model.
• update the ontocat jar in local & svn version (DONE) 
  • commit to svn (DONE) 
• ontologies directory changed: this is included in the project , so update the configuration file.
• update from svn . Eric has added the manuals inside the doc directory .
• merge the pheno model with the contents of teh bbmri model. delete the bbmri model and use only pheno model . (this is the solution to the 500 error -- or just add the module auth in the bbmri model . )
• The problem with the D2RQ server is a compatibility of the .n3 file and the database . The database that is used has a different scheme (pheno database ) with the one that is described in the model file) .