Changes between Version 5 and Version 6 of DespoinaLog_molgenis35Tomolgenis14

Timestamp:

2013-02-22T11:35:06+01:00 (11 years ago)

Author:

antonak

Comment:

--

DespoinaLog_molgenis35Tomolgenis14

@@ -103 +103 @@
 COMMIT;
 
-======================================================================================
-SubCategory
-biobank_ibfk_1
-  CONSTRAINT `biobank_ibfk_5` FOREIGN KEY (`SubCategory`) REFERENCES `BiobankSubCategory` (`id`)
-  CONSTRAINT `biobank_ibfk_5` FOREIGN KEY (`SubCategory`) REFERENCES `BiobankSubCategory` (`id`),
-
-
-=============================WITH COMMENTS ===========================================
-
-CREATE TABLE `BiobankSubCategory` (
-  `id` int(11) NOT NULL,
-  PRIMARY KEY (`id`),
-  CONSTRAINT `biobanksubcategory_ibfk_1` FOREIGN KEY (`id`) REFERENCES `OntologyTerm` (`id`) ON DELETE CASCADE
-) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_unicode_ci;
-
-/* move data from BiobankCategory to BiobankSubCategory table */
-INSERT INTO BiobankSubCategory (id)
-SELECT id
-FROM BiobankCategory
-WHERE id  NOT IN ("281", "284", "285") ;
-/*WHERE name NOT IN ("A. Core Biobanks, DNA available", "B: Supporting biobanks, DNA not yet available" ,"C: Biobanken in opbouw") ;* - IF NEEDED CORRECT THE IDs/
-
-/* alter constraints */
-ALTER TABLE Biobank DROP FOREIGN KEY biobank_ibfk_5; 
-
-
-ALTER TABLE BiobankSubCategory ADD FOREIGN KEY (id) REFERENCES OntologyTerm (id) ON DELETE CASCADE; 
-NOT OK : ERROR 1050 (42S01): Table './bbmri/BiobankSubCategory' already exists
-THEN USE :  
-ALTER TABLE `BiobankSubCategory`  
-ADD CONSTRAINT `id` 
-    FOREIGN KEY (`id`) REFERENCES OntologyTerm (id) ON DELETE CASCADE;
-
-ALTER TABLE Biobank ADD FOREIGN KEY (SubCategory) REFERENCES BiobankSubCategory (id) ON DELETE RESTRICT; 
-NOT OK : ERROR 1050 (42S01): Table './bbmri/Biobank' already exists
-THEN USE : 
-ALTER TABLE `Biobank`  
-ADD CONSTRAINT `SubCategory` 
-    FOREIGN KEY (`SubCategory`) REFERENCES BiobankSubCategory (id)  ON DELETE CASCADE;
-
-
-
-/* delete moved data from BiobankCategory */
-DELETE FROM BiobankCategory
-WHERE id  NOT IN ("281", "284", "285") ;   
-/*IF NEEDED CORRECT THE IDs
-WHERE name IN ("A. Core Biobanks, DNA available", "B: Supporting biobanks, DNA not yet available" ,"C: Biobanken in opbouw") ;
-*/
-
-CREATE TABLE BiobankPersonRole (
-        id INTEGER NOT NULL
-        , PRIMARY KEY(id)
-);
-
-ALTER TABLE BiobankPersonRole ADD FOREIGN KEY (id) REFERENCES PersonRole (id) ON DELETE CASCADE;
-
-alter table OntologyTerm modify   column __Type enum('OntologyTerm','PersonRole','Species','AlternateId','BiobankCategory','BiobankTopic','BiobankDataType', 'BiobankSubCategory','BiobankPersonRole');
-
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='282';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='283';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='286';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='287';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='288';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='289';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='290';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='291';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='292';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='293';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='295';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='296';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='297';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='298';
-UPDATE OntologyTerm  SET __Type="BiobankSubCategory" WHERE id='564';
-
-/*below we resolve the problem of duplicate entries in ontology term for PersonRole*/
-
-select * from OntologyTerm where name="Software Engineer";
-delete from OntologyTerm where id=561;
-select * from BiobankPersonRole;
-insert into BiobankPersonRole values(561);
-
-select * from OntologyTerm where name="coordinator";
-delete from OntologyTerm where id=593;
-select * from BiobankPersonRole;
-insert into BiobankPersonRole values(277);
-
-select * from OntologyTerm where name="postdoc";
-delete from OntologyTerm where id=594;
- select * from BiobankPersonRole;
-insert into BiobankPersonRole values(278);
-
-select * from OntologyTerm where name="administrator";
-delete from OntologyTerm where id=595;
-select * from BiobankPersonRole;
-insert into BiobankPersonRole values(279);
-
-
-select * from OntologyTerm where name="IT responsible";
-delete from OntologyTerm where id=596;
-select * from BiobankPersonRole;
-insert into BiobankPersonRole values(280);
-
- 
-COMMIT;
-
+=============
 
 }}}