Changes between Version 104 and Version 105 of Documentation

Timestamp:

2016-10-24T14:51:03+02:00 (9 years ago)

Author:

Pieter Neerincx

Comment:

--

Documentation

@@ -4 +4 @@
 
 = Documentation relevant for multiple groups / projects =
- * RequestAccount - How to request an account for access to GCC maintained infrastructure
- * DataSharing - How to up-/download data via SFTP
+ * [wiki:RequestAccount] - How to request an account for access to GCC maintained infrastructure
+ * [wiki:DataSharing] - How to up-/download data via SFTP
  * [wiki:TransparentMultiHopSSH] - How to connect via the proxy
-
-== Documentation on the MOLGENIS software suite ==
- * [wiki:MolgenisGuide Developer Manual] - OUTDATED in progress of migration to github
- * [wiki:xQTL using xQTL workbench for multi-level QTL mapping]
- * [wiki:GccSopTrackingCode Tracking Code] - Add app statistics tracking code
- * [wiki:SORTA Using SORTA] - How to deploy SORTA in tomcat 7
- * [wiki:Molgenis-connect Using Molgenis-connect] - How to deploy Molgenis-connect in tomcat 7
-
-== Documentation on the MOLGENIS/compute ==
- * [wiki:ComputeStart MOLGENIS/compute Start page] featuring code, manuals and presentations.
 
 == GCC Cloud VMs / Jenkins / Tomcat / MySQL / !WordPress ==
@@ -30 +20 @@
 
 == High Performance Computing (HPC) infra ==#GCC_HPC
- * [wiki:HPC Version 2.x] - How to compute on the ''Calculon'', ''Boxy'', ''Zinc-Finger'' and ''Leucine-Zipper'' Clusters
+How to compute on the ''Calculon'', ''Boxy'', ''Zinc-Finger'' and ''Leucine-Zipper'' Clusters.
  * [wiki:HPC_versions Overview] - Description of the different HPC environments
+==== For Users ====
+ * [wiki:RequestAccount Getting access] - How to request an account.
+ * [wiki:HPC_resources Available resources] - What is available and where.
+ * [wiki:HPC_login Login] - How to start a session.
+ * [wiki:HPC_storage Storage SOP] - What is stored where.
+ * [wiki:HPC_analysis Analyses SOP] - How to manage your jobs on the cluster.
+ * [wiki:HPC_support Support] - FAQs, mailinglists, courses and contact info to get in touch with an admin.
+ * [wiki:HPC_maintenance Scheduled Maintenance] - Policy and dates for scheduled maintenance.
+==== For Admins ====
+ * [wiki:HPC_admin_accounts SOP Accounts] - Managing users and groups for the HPC infrastructure.
+ * [wiki:HPC_deploy Deploy Apps & Data] - SOP for central deployment of software and reference data sets.
+ * [wiki:HPC_admin_storage Shared Storage Config] - How are logical file systems related to physical ones.
+ * [wiki:HPC_admin_compute Compute Config] - SLURM schedulers, partitions and nodes.
 
-== New employee ==
+== Documentation for the MOLGENIS software suite ==
+ * [wiki:MolgenisGuide Developer Manual] - OUTDATED in progress of migration to github
+ * [wiki:xQTL using xQTL workbench for multi-level QTL mapping]
+ * [wiki:GccSopTrackingCode Tracking Code] - Add app statistics tracking code
+ * [wiki:SORTA Using SORTA] - How to deploy SORTA in tomcat 7
+ * [wiki:Molgenis-connect Using Molgenis-connect] - How to deploy Molgenis-connect in tomcat 7
+
+== Documentation for the MOLGENIS/compute script generator ==
+ * [wiki:ComputeStart MOLGENIS/compute Start page] featuring code, manuals and presentations.
+
+= Documentation for specific projects / groups =
+
+== Internal GCC SOPs ==
  * [wiki:GCCSopNewEmployee SOP new Employee (employee)] - Manual for employee
  * [wiki:GCCSopNewEmployeeGCC SOP New Employee (team)] - Manual for team
- * IntellijTips - Tips for using IntelliJ
-
-= Documentation for specific projects / groups =
-== Internal GCC SOPs ==
  * [wiki:SopPrintScrum How to print the scrum cards]
  * [wiki:ConnectToXeroxPrintersForMac Connect to Xerox printers for Mac OS X]