News

Enlighten Your Research Global Award: Virtual Machine Images for Life Science Research

Denver (USA) 18 November 2013 – One of the four prestigious "Enlighten Your Research Global" has been awarded to an idea developed by an ELIXIR working group for the sharing of virtual machines over research and education networks.

• Posted: 10 years ago (Updated: 10 years ago)
• Author: george
• Categories: MCF
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MOLGENIS/compute at IWSG-2013

​MOLGENIS/compute was presented at 5th International Workshop on Science Gateways, IWSG 2013, Zurich, Switzerland

• Posted: 11 years ago
• Author: george
• Categories: MCF
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Visual Analytics for Bio-Workflows at NBIC-2013

​Towards visual analytics of bio-workflows presentation was given at the NBIC-2013 conference, Lunteren, Netherlands

• Posted: 11 years ago (Updated: 11 years ago)
• Author: george
• Categories: MCF
• Comments (0)

Visual Analytics for Bio-Workflows at BIOINFORMATICS-2013

"Visualization of bioinformatics workflows for ease of understanding and design activities" paper will be presented at the BIOSTEC-BIOINFORMATICS-2013 conference, on February 11th, 2013, Bercelona, Spain. [​http://www.molgenis.org/raw-attachment/blog ...

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• Posted: 12 years ago (Updated: 12 years ago)
• Author: george
• Categories: MCF
• Comments (0)

MOLGENIS/compute workshop at BioAssist meeting

MOLGENIS/compute workshop took place at the NBIC Bio Assist meeting, in Utrect, Oct.12, 2012

• Posted: 12 years ago (Updated: 12 years ago)
• Author: george
• Categories: MCF
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Welcome to the Genomics Coordination Centre

The center for genomics databases and analysis tools, courses and workshops.

Contact head Morris Swertz (m.a.swertz@…) for more information or check GccTeam or AboutGcc

Study Capturing and Sharing Applications ​MOLGENIS - biosoftware toolkit ​XGAP - GWAS and GWL ​AnimalDB - animal observation ​MutationDB - mutations and patients ​Pheno - phenotype observations ​MAGE - microarray database

Analysis Applications ​Sequencing - Pipelines for NGS data analysis and annotation ​Imputation - Pipelines for imputation R/QTL - R package QTL analysis ​OntoCAT - ontology toolkit Design GG - experimental design of QTL experiments Genomic Islands - genomic islands PeakML format - file format for mass spectrometry data MzMatch - pipeline for mass spectrometry experiments in the area of metabolomics

Intranet GccGettingStarted - overview for new GCC participants MolgenisPlugins - overview of GCC plugins GccMeetings - Notes on our work meetings GccManuals - How to use the software and servers that we have GccLinks - Hyperlinks to papers and websites of interest GccTeam - Members of the group GccCalendar - Meetings etc GccGroup - Our mailing list and group discussion site GccServers - How to connect to our servers GccIfolder - How to connect to our iFolder GccLogs - Logbooks of GCC people

Collaborations & Projects ​GBIC - Groningen Bioinformatics Center, our method partner ​Genetics - UMCG genetics department hosts the GccTeam ​http://www.rug.nl/cit/index - Groningen Center for Information Technology hosts our data and computations ​BBMRI.NL - Project lead of BBMRI-NL Bioinformatics ​NBIC - Lead Biobanking task force Netherlands BioInformatics Center ​LifeLines - Developing IT infrastructure for 30yr/165.000 people cohort study ​EBI - Visitor European Bioinformatics Institute ​EU-GEN2PHEN - Associated partner Genotype to Phenotype project ​CASIMIR - Invited partner Coordination and Sustainability of International Mouse Informatics Resources ​SYSGENET - European systems genetics network