MOLGENIS data model mapping overview
Note: the 'extends' is not without errors!
Status: draft
| XGAP | Pheno | Merge | Module | Extends | Remove
|
| Job | | Job | cluster | matrix |
|
| Subjob | | Subjob | cluster | matrix |
|
| Analysis | | Analysis | cluster | matrix |
|
| ParameterSet | | ParameterSet | cluster | matrix |
|
| ParameterName | | ParameterName | cluster | matrix |
|
| ParameterValue | | ParameterValue | cluster | matrix |
|
| DataSet | | DataSet | cluster | matrix |
|
| DataName | | DataName | cluster | matrix |
|
| DataValue | | DataValue | cluster | matrix |
|
| SelectedParameter | | SelectedParameter | cluster | matrix |
|
| SelectedData | | SelectedData | cluster | matrix |
|
| MolgenisUserGroup | | MolgenisUserGroup | core | |
|
| MolgenisUser | | MolgenisUser | core | |
|
| MolgenisEntityMetaData | | MolgenisEntityMetaData | core | |
|
| Identifiable | Identifiable | Identifiable | core | |
|
| | Nameable | Nameable | core | |
|
| Describable | | Describable | core | | ?
|
| OntologyTerm | OntologyTerm | OntologyTerm | crossref | study |
|
| URI | | URI | crossref | study | ?
|
| BibliographicReference | | BibliographicReference | crossref | study | ?
|
| OntologySource | Ontology | Ontology | crossref | study |
|
| DecimalDataElement | | DecimalDataElement | matrix | |
|
| Data | | DataSet | matrix | | rename?
|
| DimensionElement | ~InvestigationElement | DimensionElement | matrix | |
|
| DataElement | | DataElement | matrix | |
|
| TextDataElement | | TextDataElement | matrix | |
|
| | ObservedValue | ObservedValue | pheno | study |
|
| | InferredValue | InferredValue | pheno | study |
|
| Protocol | Protocol | Protocol | study | matrix |
|
| ProtocolApplication | ProtocolApplication | ProtocolApplication | study | matrix |
|
| Investigation | | Investigation | study | matrix |
|
| Subject | ObservationTarget | Subject | study | matrix |
|
| Strain | Panel | Panel | study | matrix |
|
| Individual | Individual | Individual | study | matrix |
|
| Trait | ObservableFeature | Feature | study | matrix |
|
| Sample | | Sample | xgap | study |
|
| PairedSample | | PairedSample | xgap | study |
|
| Chromosome | | Chromosome | xgap | study |
|
| Locus | | Locus | xgap | study |
|
| NMRBin | | NMRBin | xgap | study |
|
| Clone | | Clone | xgap | study |
|
| Derived | | Derived | xgap | study |
|
| Factor | | Factor | xgap | study |
|
| Gene | | Gene | xgap | study |
|
| Protein | | Protein | xgap | study |
|
| Metabolite | | Metabolite | xgap | study |
|
| Phenotype | | Phenotype | xgap | study |
|
| Marker | | Marker | xgap | study |
|
| Probe | | Probe | xgap | study |
|
| Spot | | Spot | xgap | study |
|
| ProbeSet | | ProbeSet | xgap | study |
|
| MassPeak | | MassPeak | xgap | study |
|
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