| 5 | | Currently available documentation: |
| 6 | | |
| 7 | | * '''MolgenisIntro''' -- Introduction into MOLGENIS |
| 8 | | |
| 9 | | * '''User guide''' |
| 10 | | * MolgenisUserInterface -- How to browse and edit data |
| 11 | | * MolgenisBatchLoading -- How to import datasets from CSV files |
| 12 | | * MolgenisRinterface -- How to connect to your MOLGENIS via R |
| 13 | | * MolgenisSoapInterface -- How connect to your MOLGENIS via web services (in Taverna) |
| 14 | | * Generate a RDF/Sparql interface |
| 15 | | |
| 16 | | * '''Developer Guide''' |
| 17 | | * ''Installing MOLGENIS development kit'' |
| 18 | | * MolgenisOnWindows -- How to setup the generator on Microsoft Windows |
| 19 | | * MolgenisOnUbuntu -- How to setup the generator on Ubuntu Linux |
| 20 | | * MolgenisOnEclipse -- How to get a useful Eclipse installed |
| 21 | | * ''Using the generator'' |
| 22 | | * MolgenisWorkspaceBasics -- How to open a MOLGENIS workspace |
| 23 | | * MolgenisGeneratorBasics -- How to use the generator |
| 24 | | * MolgenisAddressBookExample -- How to generate a new MOLGENIS from scratch |
| 25 | | * MolgenisFromExisting -- How to generate a MOLGENIS from an existing database |
| 26 | | * ''Using the XML modelling language'' |
| 27 | | * MolgenisLanguageReference -- How to use the language elements |
| 28 | | * MolgenisDtd -- Language definition |
| 29 | | * ''Using the plugin framework'' |
| 30 | | * MolgenisPlugin -- How to add a plugin to your MOLGENIS |
| 31 | | * MolgenisDatabase -- How to use the MOLGENIS database backend from your plugin |
| 32 | | * MolgenisEmail -- How to send emails from your MOLGENIS |
| 33 | | * [http://gbic.target.rug.nl:8080/hudson/job/molgenis/ws/3.3/build/javadoc/index.html MolgenisJavaDoc] -- Overview of the MOLGENIS components |
| | 5 | 1. '''[MolgenisIntro Introduction into MOLGENIS]''' |
| | 6 | 1. '''User guide''' |
| | 7 | * [MolgenisUserInterface User interface] -- How to browse and edit data |
| | 8 | * [MolgenisBatchLoading Batch loading] -- How to import datasets from CSV files |
| | 9 | * [MolgenisRinterface R interface] -- H to connect to your MOLGENIS via R |
| | 10 | * [MolgenisSoapInterface SOAP interface] -- How connect to your MOLGENIS via web services (in Taverna)' |
| | 11 | 1. '''Installing MOLGENIS development kit''' |
| | 12 | * [MolgenisOnWindows Windows] -- How to setup the generator on Microsoft Windows |
| | 13 | * [MolgenisOnUbuntu Ubuntu] -- How to setup the generator on Ubuntu Linux |
| | 14 | * [MolgenisOnEclipse Eclipse] -- How to get a useful Eclipse installed |
| | 15 | 1. '''Using the generator''' |
| | 16 | * [MolgenisWorkspaceBasics MOLGENIS workspace basics] |
| | 17 | * [MolgenisGeneratorBasics Run the generator] |
| | 18 | * [MolgenisAddressBookExample Generate a new MOLGENIS from scratch] |
| | 19 | * [MolgenisFromExisting Generate a MOLGENIS from an existing database] |
| | 20 | 1. '''Using the modelling language''' |
| | 21 | * [MolgenisLanguageReference MOLGENIS language reference] |
| | 22 | * [MolgenisDtd -- DTD] |
| | 23 | 1. '''Creating hand-written plug-ins''' |
| | 24 | * [MolgenisPlugin Adding a user interface plugin] |
| | 25 | * [MolgenisDatabase Using MOLGENIS database backend] |
| | 26 | * [MolgenisEmail Sending emails] |
| | 27 | * [http://gbic.target.rug.nl:8080/hudson/job/molgenis/ws/3.3/build/javadoc/index.html MolgenisJavaDoc JavaDoc] |
| | 28 | * [MolgenisCustomCommand Adding custom buttons to generated forms] |
