wiki:ObservStart/OmicsConnect

Version 4 (modified by Robert Hastings, 12 years ago) (diff)

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wanted entities

Domain model:

observation

organization

  • Study: a bundle of experiments typically published in a paper
  • Experiment: a story of experimental objectives and outcomes
    • discussion: refers to dataSets?
  • DataSet?: a group of ProtocolApplication?
    • discussion: homogeneous (i.e. using one protocol only?)
  • SelectionCriteria?: conditions of relationship between Panel
    • xref to Source and Target panel
    • has: number of individuals, details
    • discussion: how to formalize

attribution

  • Contact: an entity having contact details such as address
  • Person: to refer to natural actors in the process
  • Organization: organization actor, Can this also be a used when we need to acknowledge a funder?
  • PersonAffiliation?: association between individual and Organization
  • Submission: the event of data contribution
    • dicussion: what are Submissable items? I.e. can have Contribution
  • Contribution: metadata describing Role of Person in a Study (?)
  • Licences: Can we use CC licences, attach to Study Details or Data sets?

references

  • Hotlinks: hyperlinks to external? Or internal?
  • Citation: literature reference
    • discussion: what entities can have references?
  • OntologyReference?: reference to coding lists
    • Species: reference to species definitions
  • AlternateIds?: alternative identifiers
  • FeatureAnnotion?: qualitative association between Feature and OntologyTerm?
    • has 'exactmatch' and 'description'

genome

gwas central specific