Changes between Version 13 and Version 14 of SopConvertLifeLinesGenoData


Ignore:
Timestamp:
2012-04-04T07:03:33+02:00 (13 years ago)
Author:
Morris Swertz
Comment:

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  • SopConvertLifeLinesGenoData

    v13 v14  
    8585study = study<n>
    8686
    87 #get chromosomes out of file
    88 chrs=`awk '{print $1}' ${prefix}.bim | sort -nur`
     87#get all chromosomes out of .bim file
     88chrs=`awk '{print $1}' ${study}.bim | sort -nur`
    8989echo "Chromosome in Map File: ${chrs}" | tr "\n" " "
    9090echo ""