News

Enlighten Your Research Global Award: Virtual Machine Images for Life Science Research

Denver (USA) 18 November 2013 – One of the four prestigious "Enlighten Your Research Global" has been awarded to an idea developed by an ELIXIR working group for the sharing of virtual machines over research and education networks.

• Posted: 10 years ago (Updated: 10 years ago)
• Author: george
• Categories: MCF
• Comments (0)

MOLGENIS/compute at IWSG-2013

​MOLGENIS/compute was presented at 5th International Workshop on Science Gateways, IWSG 2013, Zurich, Switzerland

• Posted: 11 years ago
• Author: george
• Categories: MCF
• Comments (0)

Visual Analytics for Bio-Workflows at NBIC-2013

​Towards visual analytics of bio-workflows presentation was given at the NBIC-2013 conference, Lunteren, Netherlands

• Posted: 11 years ago (Updated: 11 years ago)
• Author: george
• Categories: MCF
• Comments (0)

Visual Analytics for Bio-Workflows at BIOINFORMATICS-2013

"Visualization of bioinformatics workflows for ease of understanding and design activities" paper will be presented at the BIOSTEC-BIOINFORMATICS-2013 conference, on February 11th, 2013, Bercelona, Spain. [​http://www.molgenis.org/raw-attachment/blog ...

(Read more)

• Posted: 12 years ago (Updated: 12 years ago)
• Author: george
• Categories: MCF
• Comments (0)

MOLGENIS/compute workshop at BioAssist meeting

MOLGENIS/compute workshop took place at the NBIC Bio Assist meeting, in Utrect, Oct.12, 2012

• Posted: 12 years ago (Updated: 12 years ago)
• Author: george
• Categories: MCF
• Comments (0)

Welcome to the MOLGENIS biosoftware project

Use MOLGENIS to track and trace all your research data via rich user interface and integrate with your analysis tools in R, Java and web services. Just download one of the existing systems in the MOLGENIS family or generate your own in three steps:

1. Model what you need in a simple XML file ​example,
2. Run the generator
3. Use your database ​example.

Use MOLGENIS

MOLGENIS is a suite of tools such as:

• eXtensible Genotype and Phenotype database (XGAP)
• Phenotype Object Model database (Pheno-OM)
• MAGE-TAB microarray gene experiment object model (MAGETAB-OM)
• Design of Genetical Genomics Experiments (designGG)

See MolgenisSystemList for overview.

Generate your own MOLGENIS

• MolgenisGuide -- How to generate molgenis
• MolgenisDownload -- Get the software
• MolgenisFaq -- Frequently asked questions about MOLGENIS and its use
• MolgenisSystemList -- Catalog of existing MOLGENIS systems you can use as starting point
• MolgenisSourceCode -- Browse and hack the source code
• MolgenisJavaDoc? -- Explore the APIs
• MolgenisGoogleGroup -- Join our google group mail forum for all things around MOLGENIS
• Watch it evolve: ChangeLog, ​RoadMap

For a complete list of available wiki pages, see the TitleIndex.

Getting involved

​Register and then login to:

• TracGuide -- Read on how to use this website, and how to add content
• MolgenisProject -- Who is currently behind MOLGENIS
• Apply for a MolgenisInternship
• Add to the MolgenisGuide,
• brainstorm new ideas on MolgenisEnhancements
• or hack the MolgenisSourceCode.
• SequencingWiki

MOLGENIS Users

The MOLGENIS project is supported by the University Medical Center Groningen ​UMCG, Groningen Bioinformatics Center ​GBIC, European Bioinformatics Institute ​EBI and the Netherlands Bioinformatics Center ​NBIC. Are you curious who is using MOLGENIS, or would like to list your own name, visit the MolgenisUsers? page. Also don't hesitate to add to the MolgenisSystemList