Changes between Version 5 and Version 6 of xQTLBioinformaticianRCheatSheet

Timestamp:

2011-10-27T10:52:01+02:00 (13 years ago)

Author:

jvelde

Comment:

--

xQTLBioinformaticianRCheatSheet

@@ -2 +2 @@
 
 = [wiki:xQTL xQTL workbench] - Cheat sheet for R scripting =
+
+Start off by connecting R to your application database. Click '''R api''' in the top right corner and copy-paste the content into an R terminal. The R API is usually available under !http://{myhost}/{myapplication}/api/R/. You can now use the following commands:
 
 == > Downloading ==
@@ -51 +53 @@
 === Upload a file ===
 
-`uri <- paste(dbpath,"/uploadfile",sep="")`[[BR]]
-`path <- "testimage.png"`[[BR]]
-`postForm(uri,investigation_name=investigationname, name="my_image", type="InvestigationFile", file=fileUpload(filename=path), style='HTTPPOST')`
+`uri <- paste(serverpath,"/uploadfile",sep="")`[[BR]]
+`postForm(uri,`[[BR]]
+` name = "celegan.jpg",`[[BR]]
+` Investigation_name = "Studie9_10",`[[BR]]
+` type = "InvestigationFile",`[[BR]]
+` file = fileUpload(filename = "~/celegan.jpg"),`[[BR]]
+` style = "HTTPPOST"`[[BR]]
+`)`
 
 == > Automized xQTL analysis ==