Changes between Version 6 and Version 7 of xQTLBioinformaticianRCheatSheet
- Timestamp:
- 2011-10-27T14:36:09+02:00 (13 years ago)
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xQTLBioinformaticianRCheatSheet
v6 v7 7 7 == > Downloading == 8 8 9 === Retrieve annotations, all attributes ===9 === Annotations, all attributes === 10 10 11 11 `find.marker()`[[BR]] … … 13 13 `find.investigation()` 14 14 15 === Retrieve annotations, specific attributes ===15 === Annotations, specific attributes === 16 16 17 17 `find.marker()[,c("name")]`[[BR]] … … 19 19 `find.investigation()[,c("id","name")]` 20 20 21 === Get a simple overview of alldata matrices ===21 === Overview of data matrices === 22 22 23 23 `find.data()[,c("id","name","investigation","investigation_name")]` 24 24 25 === Retrieve a data matrix===25 === Data matrix values === 26 26 27 27 `dataId <- 0`[[BR]] … … 31 31 == > Uploading == 32 32 33 === A dd annotations ===33 === Annotations === 34 34 35 35 `invId <- 0`[[BR]] … … 37 37 `add.marker(name="testMarker2", cm="11.3", bpstart="456237", investigation_id=invId)` 38 38 39 === Add a completely new data matrix, includingannotations ===39 === New data matrix, plus annotations === 40 40 41 41 `invId <- 0`[[BR]] … … 51 51 `add.datamatrix(data, name="myResults", investigation_id=invId, rowtype="Marker", coltype="Individual", valuetype="Text")` 52 52 53 === Upload a file ===53 === File === 54 54 55 55 `uri <- paste(serverpath,"/uploadfile",sep="")`[[BR]]
