Changes between Version 5 and Version 6 of xQTLUserReview


Ignore:
Timestamp:
2011-11-18T15:04:58+01:00 (13 years ago)
Author:
jvelde
Comment:

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  • xQTLUserReview

    v5 v6  
    1414* Find genes in a region and get their QTLS (sounds like gBrowse)
    1515* Ofcourse everything in document 'concept map'
     16Matthias:
     17* Need a bit more than just 'gene -> QTL' info, so like the Advanced button in the simple screen
     18* Select a matrix with QTL results, then grab a row or column (e.g. select a trait)
     19* Filter within that list using e.g. a threshold to get a smaller list of e.g. significant markers
     20* Using this trait and marker, build a nice table with a report
     21* Even more advanced: cross-datamatrix filtering. Select an individual and get from all matrices values which adhere to a certain filter.
     22* Relation between promotor-gene-transcript-protein-enzyme-pathways should be used preferably to create a biological valuable report
     23* gBrowse as an exploration tool would be super to have, and is reusable for many organisms
    1624
    1725== Panacea xQTL review Wed 9 nov 2011 ==