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Enlighten Your Research Global Award: Virtual Machine Images for Life Science Research
Denver (USA) 18 November 2013 – One of the four prestigious "Enlighten Your Research Global" has been awarded to an idea developed by an ELIXIR working group for the sharing of virtual machines over research and education networks.
MOLGENIS/compute at IWSG-2013
MOLGENIS/compute was presented at 5th International Workshop on Science Gateways, IWSG 2013, Zurich, Switzerland
Visual Analytics for Bio-Workflows at NBIC-2013
Towards visual analytics of bio-workflows presentation was given at the NBIC-2013 conference, Lunteren, Netherlands
Visual Analytics for Bio-Workflows at BIOINFORMATICS-2013
"Visualization of bioinformatics workflows for ease of understanding and design activities" paper will be presented at the BIOSTEC-BIOINFORMATICS-2013 conference, on February 11th, 2013, Bercelona, Spain. [http://www.molgenis.org/raw-attachment/blog ...
MOLGENIS/compute workshop at BioAssist meeting
MOLGENIS/compute workshop took place at the NBIC Bio Assist meeting, in Utrect, Oct.12, 2012
Welcome to MOLGENIS Computational Framework (MCF)
What is MCF ?
MOLGENIS Computational Framework is a framework for bioinformatics which enables data and computational workflow management in a distributed computational environment. The system was developed as a part of Netherlands Bioinformatics for Proteomics Platform.
Why MFC ?
High-throughput bioinformatics research is complex and requires the combination of multiple experimental approaches each producing large amounts of diverse data. The analysis and evaluation of these data are equally complex requiring specific integrations of various software components into complex workflows.
We provide functionality for bioinformaticians to specify the workflow of commands with simple interfaces, while at the same time scale up to hundreds of jobs to get the terabytes of genetic data processed by recent methods.
How does it work?
Our data management is built on Molgenis. The system can support several back-ends. We propose to the default MCF back-end built on the GridGain, which can be replaced by another cloud or grid computational infrastructure. The MCF can be used as the complete product, or the parts of MCF can be re-used separately.
- The detailed MCF architecture can be found at Architecture
- The code examples can be found at Examples
- The set-up information can be found at Installation
- Our collaborations and usages of MCF can be found at Collaborations
Who is behind MCF ?
MCF is created in the Genomics Coordination Center team.
People:
Attachments (13)
- logos1.jpg (26.0 KB) - added by 12 years ago.
- Swertz_eBioGrid_final_presentation.pdf (6.0 MB) - added by 12 years ago.
- October_2012.pdf (4.2 MB) - added by 12 years ago.
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molgenis_compute-dc6ac9c.zip (21.8 MB) - added by 12 years ago.
Distribution of MOLGENIS/compute v4
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molgenis_compute-fb05467.zip (21.8 MB) - added by 12 years ago.
Distribution of MOLGENIS Compute IV
- DijkstraTargetConference2013.pdf (7.8 MB) - added by 11 years ago.
- IWSG-2013.pdf (2.1 MB) - added by 11 years ago.
- IWSG-2013-presentation.pdf (7.4 MB) - added by 11 years ago.
- tutorial.html (343.9 KB) - added by 11 years ago.
- molgenis-compute-core-0.0.1-SNAPSHOT-distribution.zip (6.0 MB) - added by 11 years ago.
- molgenis-compute-core-1.0.0-20140402.104325-2-distribution.zip (8.0 MB) - added by 11 years ago.
- MolgenisCompute_2014-04-15_FvD.pdf (20.5 MB) - added by 11 years ago.
- MolgenisCompute_2014_05-15_FvD.pdf (20.8 MB) - added by 11 years ago.
